General Information

  • ID:  hor004301
  • Uniprot ID:  E9G1N8
  • Protein name:  Tachykinin-related peptide 1
  • Gene name:  NA
  • Organism:  Daphnia pulex (Water flea)
  • Family:  Tachykinin family
  • Source:  animal
  • Expression:  NA
  • Disease:  NA
  • Comments:  NA
  • Taxonomy:  Daphnia (genus), Daphniidae (family), Anomopoda (infraorder), Cladocera (suborder), Diplostraca (order), Phyllopoda (subclass), Branchiopoda (class), Crustacea (subphylum), Pancrustacea, Mandibulata, Arthropoda (phylum), Panarthropoda, Ecdysozoa, Protostomia, Bilateria, Eumetazoa, Metazoa (kingdom), Opisthokonta, Eukaryota (superkingdom), cellular organisms
  • GO MF:  NA
  • GO BP:  NA
  • GO CC:  NA

Sequence Information

  • Sequence:  TPNSRAFLGMR
  • Length:  11
  • Propeptide:  MAVLMTVLAYCQPASAAATAVTDDDELMARQTRGLVLRSWRNAQQQTDHSADKTPSAKVAEPILPSQKEAMVFNGLPISMRLVLLQHLAGYDKRTPNSRAFLGMRGKKSSPPGADALTMEDNQLDDASGWPQGDILPDTYYFGPAPQKKKMHGEKFLGMRGKKMMNGLADGTAFIPNWRERYIYQEPFEKKRAPSSNSFMGMRGKRSESTTPTPNDYQFFNDDIIVDEELPDVDSKVSPRRSQERTPI
  • Signal peptide:  MAVLMTVLAYCQPASA
  • Modification:  NA
  • Glycosylation:  NA
  • Mutagenesis:  NA

Activity

  • Function:  NA
  • Mechanism:  NA
  • Cross BBB:  NA
  • Target:  NA
  • Target Unid:  NA
  • IC50: NA
  • EC50: NA
  • ED50: NA
  • kd: NA
  • Half life: NA

Structure

  • Disulfide bond:  NA
  • Structure ID:  AF-E9G1N8-F1(AlphaFold_DB_ID)
  • Structure: (PDB_ID-from https://www.rcsb.org/; AlphaFold_DB_ID-from https://alphafold.ebi.ac.uk/; hordbxxxxxx_AF2.pdb was predicted structure by AlphaFold2; hordbxxxxxx_ESM.pdb was predicted structure by ESMFold)
  •    hor004301_AF2.pdbhor004301_ESM.pdb

Physical Information

Mass: 142799 Formula: C53H88N18O15S
Absent amino acids: CDEHIKQVWY Common amino acids: R
pI: 12.5 Basic residues: 2
Polar residues: 4 Hydrophobic residues: 3
Hydrophobicity: -51.82 Boman Index: -2945
Half-Life: 7.2 hour Half-Life Yeast: >20 hour
Half-Life E.Coli: >10 hour Aliphatic Index 44.55
Instability Index: 1892.73 Extinction Coefficient cystines: 0
Absorbance 280nm: 0

Literature

  • PubMed ID:  21830762
  • Title:  Genomics, Transcriptomics, and Peptidomics of Daphnia Pulex Neuropeptides and Protein Hormones